Detalhe da pesquisa
1.
Revealing mechanisms of infectious disease spread through empirical contact networks.
PLoS Comput Biol
; 17(12): e1009604, 2021 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-34928936
2.
Regulation of interferon stimulated gene expression levels at homeostasis.
Cytokine
; 126: 154870, 2020 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-31629105
3.
High-Resolution Sequencing of Viral Populations during Early Simian Immunodeficiency Virus Infection Reveals Evolutionary Strategies for Rapid Escape from Emerging Env-Specific Antibody Responses.
J Virol
; 92(7)2018 04 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29343575
4.
Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection.
PLoS Pathog
; 13(7): e1006510, 2017 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-28759651
5.
Correction: Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection.
PLoS Pathog
; 13(9): e1006620, 2017 Sep.
Artigo
em Inglês
| MEDLINE | ID: mdl-28910384
6.
A penalized regression approach to haplotype reconstruction of viral populations arising in early HIV/SIV infection.
Bioinformatics
; 33(16): 2455-2463, 2017 Aug 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28379346
7.
Broad CTL Response in Early HIV Infection Drives Multiple Concurrent CTL Escapes.
PLoS Comput Biol
; 11(10): e1004492, 2015 Oct.
Artigo
em Inglês
| MEDLINE | ID: mdl-26506433
8.
Constructing lower-bounds for CTL escape rates in early SIV infection.
J Theor Biol
; 352: 82-91, 2014 Jul 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-24603063
9.
Sampling HIV intrahost genealogies based on a model of acute stage CTL response.
Bull Math Biol
; 74(3): 509-35, 2012 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-21739335
10.
The coalescence of intrahost HIV lineages under symmetric CTL attack.
Bull Math Biol
; 74(8): 1818-56, 2012 Aug.
Artigo
em Inglês
| MEDLINE | ID: mdl-22644341
11.
Analysis of a stochastic predator-prey model with applications to intrahost HIV genetic diversity.
J Math Biol
; 65(6-7): 1285-336, 2012 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-22139471
12.
Whole-genome analysis of SARS-CoV-2 in a 2020 infection cluster in a nursing home of Southern Italy.
Infect Genet Evol
; 99: 105253, 2022 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-35189404
13.
Properties of Weir and Cockerham's Fst estimators and associated bootstrap confidence intervals.
Theor Popul Biol
; 79(1-2): 39-52, 2011.
Artigo
em Inglês
| MEDLINE | ID: mdl-21094655
14.
The distribution of Fst and other genetic statistics for a class of population structure models.
J Math Biol
; 62(2): 203-89, 2011 Feb.
Artigo
em Inglês
| MEDLINE | ID: mdl-20186418
15.
Interferon stimulated binding of ISRE is cell type specific and is predicted by homeostatic chromatin state.
Cytokine X
; 3(4): 100056, 2021 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-34409284
16.
Tree-Based Co-Clustering Identifies Chromatin Accessibility Patterns Associated With Hematopoietic Lineage Structure.
Front Genet
; 12: 707117, 2021.
Artigo
em Inglês
| MEDLINE | ID: mdl-34659332
17.
SIV infection duration largely determines broadening of neutralizing antibody response in macaques.
J Clin Invest
; 130(10): 5413-5424, 2020 10 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-32663192
18.
Investigating Functional Roles for Positive Feedback and Cellular Heterogeneity in the Type I Interferon Response to Viral Infection.
Viruses
; 10(10)2018 09 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-30241427
19.
Computational inference methods for selective sweeps arising in acute HIV infection.
Genetics
; 194(3): 737-52, 2013 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-23666940